Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_31975 | Not Available | Positive | 6933093 - 6934070 | 34256.8 |
| hypothetical protein | APR52_31980 | Not Available | Negative | 6934153 - 6936282 | 73799.9 |
| luxr family transcriptional regulator | APR52_31985 | Not Available | Positive | 6936471 - 6937451 | 36155.2 |
| alcohol dehydrogenase | APR52_31990 | Q46444 | Negative | 6937479 - 6939608 | 76822.7 |
| fis family transcriptional regulator | APR52_31995 | Not Available | Positive | 6939742 - 6941004 | 45236.9 |
| transcriptional regulator | APR52_32000 | Not Available | Negative | 6941006 - 6941854 | 29911.5 |
| 3-isopropylmalate dehydratase | APR52_32005 | Not Available | Positive | 6941966 - 6943249 | 45715.0 |
| 3-isopropylmalate dehydratase | APR52_32010 | Q58673 | Positive | 6943246 - 6943761 | 18625.4 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR52_32015 | Not Available | Positive | 6943844 - 6944716 | 31665.7 |
| hypothetical protein | APR52_32020 | Not Available | Positive | 6944760 - 6945755 | 34238.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
