Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_31925 | Not Available | Positive | 6920864 - 6921928 | 38460.1 |
| abc transporter permease | APR52_31930 | Not Available | Positive | 6921994 - 6923325 | 48359.1 |
| abc transporter atp-binding protein | APR52_31935 | Not Available | Positive | 6923474 - 6924286 | 29725.1 |
| amp-dependent synthetase | APR52_31940 | Not Available | Positive | 6924621 - 6925868 | 44884.6 |
| hypothetical protein | APR52_31945 | Not Available | Negative | 6925859 - 6926896 | 36428.6 |
| citrate synthase | APR52_31950 | P39119 | Negative | 6926976 - 6928088 | 39015.8 |
| citrate synthase | APR52_31955 | D4GS06 | Positive | 6928172 - 6929338 | 40736.8 |
| glutamine amidotransferase | APR52_31960 | O06006 | Negative | 6929348 - 6929926 | 21025.0 |
| succinate-semialdehyde dehydrogenase | APR52_31965 | Q9I6M5 | Negative | 6930054 - 6931520 | 51507.9 |
| peptidase m48 | APR52_31970 | Not Available | Negative | 6931648 - 6932829 | 42164.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
