Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_31870 | Not Available | Negative | 6908604 - 6909518 | 33341.6 |
| hypothetical protein | APR52_31875 | Not Available | Negative | 6909518 - 6910612 | 40040.0 |
| feruloyl esterase | APR52_31885 | Not Available | Negative | 6911267 - 6912859 | 56655.8 |
| 3-hydroxybutyryl-coa dehydrogenase | APR52_31890 | Q988C8 | Negative | 6913167 - 6914054 | 31915.4 |
| hypothetical protein | APR52_31895 | Q06065 | Positive | 6914385 - 6915818 | 52857.0 |
| hypothetical protein | APR52_31900 | Not Available | Negative | 6915831 - 6916301 | 16687.0 |
| crp/fnr family transcriptional regulator | APR52_31905 | Not Available | Negative | 6916298 - 6917086 | 28533.4 |
| long-chain fatty acid--coa ligase | APR52_31910 | Not Available | Positive | 6917172 - 6919145 | 71703.9 |
| abc transporter atp-binding protein | APR52_31915 | Not Available | Positive | 6919147 - 6919929 | 29127.4 |
| abc transporter permease | APR52_31920 | Not Available | Positive | 6919931 - 6920860 | 32934.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
