Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | APR52_31815 | Not Available | Positive | 6898441 - 6900153 | 59781.6 |
| abc transporter | APR52_31820 | Q3KBH4 | Positive | 6900150 - 6900836 | 24728.0 |
| glutathione s-transferase | APR52_31825 | Q8LE52 | Positive | 6900934 - 6901629 | 26015.3 |
| glyoxalase i | APR52_31830 | P0AC82 | Positive | 6901692 - 6902141 | 16359.2 |
| hypothetical protein | APR52_31835 | Not Available | Positive | 6902858 - 6903148 | 11252.6 |
| hypothetical protein | APR52_31840 | Not Available | Positive | 6903253 - 6903501 | 8757.42 |
| transposase | APR52_31845 | P59697 | Positive | 6903623 - 6904054 | 17048.6 |
| hypothetical protein | APR52_31855 | Not Available | Negative | 6905171 - 6906316 | 42080.7 |
| hypothetical protein | APR52_31860 | Not Available | Negative | 6906351 - 6907649 | 47241.8 |
| hypothetical protein | APR52_31865 | Not Available | Negative | 6907690 - 6908607 | 34493.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
