Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_31765 | Q9A8Z4 | Positive | 6889215 - 6889952 | 26875.2 |
| hypothetical protein | APR52_31770 | Not Available | Positive | 6890234 - 6890548 | 12149.1 |
| short-chain dehydrogenase | APR52_31775 | Not Available | Negative | 6890612 - 6891319 | 23999.5 |
| mate family efflux transporter | APR52_31780 | Q58119 | Negative | 6891357 - 6892772 | 49059.6 |
| mfs transporter | APR52_31785 | Not Available | Negative | 6892801 - 6894123 | 46587.0 |
| marr family transcriptional regulator | APR52_31790 | Not Available | Negative | 6894233 - 6894688 | 16496.7 |
| aromatic compound catabolic protein | APR52_31795 | Not Available | Positive | 6894745 - 6895293 | 19334.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | APR52_31800 | B4EG04 | Negative | 6895321 - 6896250 | 32459.0 |
| lysr family transcriptional regulator | APR52_31805 | P25547 | Positive | 6896333 - 6897232 | 31969.7 |
| iron abc transporter substrate-binding protein | APR52_31810 | P72827 | Positive | 6897357 - 6898403 | 37104.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
