Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna helicase | APR52_31715 | Not Available | Positive | 6877775 - 6879553 | 62443.3 |
| endonuclease | APR52_31720 | Not Available | Positive | 6879643 - 6880674 | 38389.6 |
| dehydratase | APR52_31725 | A7MN07 | Negative | 6880687 - 6881883 | 43952.6 |
| abc transporter substrate-binding protein | APR52_31730 | Not Available | Negative | 6881949 - 6882953 | 36470.1 |
| l-dehydroascorbate transporter large permease subunit | APR52_31735 | Not Available | Negative | 6883018 - 6884319 | 45501.2 |
| abc transporter permease | APR52_31740 | Not Available | Negative | 6884316 - 6884876 | 20745.0 |
| gntr family transcriptional regulator | APR52_31745 | P31475 | Negative | 6884962 - 6885711 | 27154.9 |
| dihydroxy-acid dehydratase | APR52_31750 | B5ZZ34 | Positive | 6885883 - 6887622 | 63032.1 |
| 2-dehydro-3-deoxygalactonokinase | APR52_31755 | Not Available | Positive | 6887631 - 6888542 | 31998.4 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | APR52_31760 | Q92RN8 | Positive | 6888539 - 6889180 | 21975.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
