Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | APR52_31510 | Not Available | Positive | 6839706 - 6840182 | 17518.1 |
| dimethylhistidine n-methyltransferase | APR52_31520 | A0R5M8 | Negative | 6840893 - 6841933 | 37420.7 |
| sulfatase maturase | APR52_31525 | A0R5N0 | Negative | 6841936 - 6843189 | 45927.1 |
| pyridine nucleotide-disulfide oxidoreductase | APR52_31530 | P95160 | Positive | 6843363 - 6844709 | 47463.9 |
| hypothetical protein | APR52_31535 | Not Available | Positive | 6844735 - 6844986 | 9383.88 |
| tat pathway signal protein | APR52_31540 | Not Available | Negative | 6845017 - 6846939 | 68790.8 |
| nuclease | APR52_31545 | Q57519 | Negative | 6847038 - 6847565 | 19433.8 |
| long-chain fatty acid--coa ligase | APR52_31550 | Not Available | Negative | 6847703 - 6849394 | 62038.6 |
| peroxiredoxin | APR52_31555 | P0C0L2 | Positive | 6849688 - 6850128 | 15294.1 |
| laci family transcriptional regulator | APR52_31560 | Not Available | Positive | 6850176 - 6851141 | 34091.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
