Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_31460 | Not Available | Negative | 6825543 - 6826046 | 18989.5 |
| peptide deformylase | APR52_31465 | Q8Y3B0 | Negative | 6826050 - 6826571 | 19322.4 |
| peptidoglycan-binding protein | APR52_31470 | Not Available | Positive | 6826732 - 6827946 | 44060.9 |
| dna processing protein dpra | APR52_31475 | P43862 | Positive | 6827963 - 6829117 | 40280.4 |
| protein smg | APR52_31480 | B1XW95 | Positive | 6829245 - 6829763 | 19182.7 |
| hypothetical protein | APR52_31485 | Not Available | Negative | 6829777 - 6832143 | 85586.2 |
| preprotein translocase subunit secf | APR52_31490 | E9RGS4 | Negative | 6832309 - 6833262 | 35075.1 |
| preprotein translocase subunit secd | APR52_31495 | E9RGS3 | Negative | 6833275 - 6835167 | 67961.5 |
| preprotein translocase subunit yajc | APR52_31500 | Q2YNM1 | Negative | 6835261 - 6835593 | 11588.6 |
| indolepyruvate ferredoxin oxidoreductase | APR52_31505 | Not Available | Negative | 6835925 - 6839527 | 131340.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
