Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | APR52_31410 | Not Available | Positive | 6817001 - 6817546 | 20002.8 |
| hypothetical protein | APR52_31415 | Not Available | Positive | 6817539 - 6818660 | 40557.3 |
| fad-binding monooxygenase | APR52_31420 | L8EUQ6 | Positive | 6818676 - 6820331 | 60287.7 |
| hypothetical protein | APR52_31425 | Not Available | Positive | 6820328 - 6820537 | 7266.55 |
| mbl fold metallo-hydrolase | APR52_31430 | Not Available | Positive | 6820534 - 6821508 | 35485.3 |
| abc transporter substrate-binding protein | APR52_31435 | Not Available | Positive | 6821556 - 6822539 | 35055.8 |
| 6-phosphogluconate dehydrogenase | APR52_31440 | Not Available | Positive | 6822576 - 6823520 | 32889.6 |
| branched-chain amino acid transporter | APR52_31445 | Not Available | Negative | 6823504 - 6823842 | 12423.4 |
| branched-chain amino acid abc transporter permease | APR52_31450 | Not Available | Negative | 6823839 - 6824579 | 26641.4 |
| methionyl-trna formyltransferase | APR52_31455 | C5CQE1 | Negative | 6824587 - 6825537 | 33413.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
