Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | APR52_31310 | Not Available | Negative | 6796469 - 6797503 | 35607.4 |
| deor family transcriptional regulator | APR52_31315 | D4GYE7 | Negative | 6797571 - 6798341 | 26674.5 |
| gdp-mannose pyrophosphatase | APR52_31320 | Q6D8X4 | Positive | 6798421 - 6799008 | 22093.2 |
| peptidase m15 | APR52_31325 | P39844 | Positive | 6799017 - 6800474 | 51849.3 |
| hypothetical protein | APR52_31330 | Not Available | Positive | 6800633 - 6802192 | 53348.1 |
| translation factor sua5 | APR52_31335 | P39153 | Negative | 6802219 - 6803220 | 34827.7 |
| phosphoribosylaminoimidazole carboxylase | APR52_31340 | P52559 | Negative | 6803228 - 6804409 | 41739.5 |
| n5-carboxyaminoimidazole ribonucleotide mutase | APR52_31345 | Q9KVT7 | Negative | 6804406 - 6804948 | 18254.1 |
| thioredoxin | APR52_31350 | P00275 | Positive | 6804985 - 6805905 | 33841.4 |
| xre family transcriptional regulator | APR52_31355 | Not Available | Positive | 6806037 - 6806336 | 10449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
