Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR52_02455 | P15939 | Positive | 514172 - 515656 | 53986.4 |
| luxr family transcriptional regulator | APR52_02460 | P23221 | Positive | 515653 - 516282 | 22977.7 |
| hypothetical protein | APR52_02465 | Not Available | Positive | 516391 - 516909 | 17053.3 |
| hypothetical protein | APR52_02470 | Not Available | Positive | 516942 - 517610 | 22931.4 |
| hypothetical protein | APR52_02475 | Not Available | Positive | 517698 - 517916 | 7606.19 |
| cmp deaminase | APR52_02480 | P68398 | Positive | 517906 - 519000 | 38725.2 |
| ld-carboxypeptidase | APR52_02485 | Q8XDJ8 | Positive | 518997 - 519995 | 35917.0 |
| hypothetical protein | APR52_02490 | Not Available | Negative | 520086 - 520421 | 12326.2 |
| adenylate cyclase | APR52_02495 | Not Available | Positive | 520769 - 521713 | 33991.6 |
| hypothetical protein | APR52_02500 | Not Available | Positive | 521848 - 522195 | 12346.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
