Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_31260 | Not Available | Negative | 6787749 - 6788543 | 28814.5 |
| hypothetical protein | APR52_31265 | Not Available | Negative | 6788540 - 6789055 | 16450.0 |
| hypothetical protein | APR52_31270 | Not Available | Negative | 6789052 - 6789549 | 18501.5 |
| glycerol acyltransferase | APR52_31275 | Not Available | Negative | 6789737 - 6791677 | 70034.2 |
| hypothetical protein | APR52_31280 | Not Available | Negative | 6791749 - 6792606 | 30057.0 |
| cro/cl family transcriptional regulator | APR52_31285 | Not Available | Positive | 6792764 - 6793498 | 28021.2 |
| orotidine 5'-phosphate decarboxylase | APR52_31290 | C5CQB2 | Negative | 6793515 - 6794339 | 29399.9 |
| uracil-dna glycosylase | APR52_31295 | Not Available | Negative | 6794373 - 6795200 | 28711.5 |
| ribosomal-protein-alanine acetyltransferase | APR52_31300 | Not Available | Negative | 6795197 - 6795751 | 20278.5 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | APR52_31305 | Q87RD1 | Negative | 6795748 - 6796476 | 24872.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
