Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | APR52_31210 | Not Available | Positive | 6776842 - 6777798 | 34664.5 |
| lysine transporter lyse | APR52_31215 | Q9KVK7 | Positive | 6777864 - 6778493 | 22244.0 |
| atp-dependent dna helicase recg | APR52_31220 | Q8XD86 | Negative | 6778519 - 6780702 | 78838.5 |
| sugar nucleotide epimerase | APR52_31225 | P77775 | Negative | 6780687 - 6782177 | 54208.0 |
| hypothetical protein | APR52_31230 | Not Available | Negative | 6782174 - 6782845 | 25225.5 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | APR52_31235 | Q47AX4 | Positive | 6782987 - 6784039 | 38558.3 |
| queuine trna-ribosyltransferase | APR52_31240 | A9BRD7 | Positive | 6784045 - 6785217 | 43644.6 |
| 3-oxoacyl-acp reductase | APR52_31245 | P0DOV5 | Positive | 6785277 - 6786053 | 27490.8 |
| hypothetical protein | APR52_31250 | Not Available | Negative | 6786128 - 6786520 | 13327.1 |
| serine endopeptidase | APR52_31255 | Not Available | Negative | 6786620 - 6787711 | 40831.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
