Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | APR52_31155 | Q3YAT5 | Negative | 6764352 - 6765800 | 50679.4 |
| amidase | APR52_31160 | Not Available | Negative | 6765898 - 6767301 | 50275.2 |
| abc transporter substrate-binding protein | APR52_31165 | A0A0H2ZGW2 | Negative | 6767306 - 6768799 | 54104.0 |
| peptide abc transporter atp-binding protein | APR52_31170 | Not Available | Negative | 6768836 - 6769642 | 29335.5 |
| salicylaldehyde dehydrogenase | APR52_31180 | O69763 | Negative | 6770675 - 6772126 | 50180.2 |
| abc transporter atp-binding protein | APR52_31185 | Not Available | Negative | 6772157 - 6772882 | 25549.3 |
| abc transporter atp-binding protein | APR52_31190 | Not Available | Negative | 6772879 - 6773637 | 26711.6 |
| abc transporter atp-binding protein | APR52_31195 | P22729 | Negative | 6773630 - 6774562 | 32396.4 |
| branched-chain amino acid abc transporter permease | APR52_31200 | Not Available | Negative | 6774559 - 6775434 | 30987.2 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_31205 | Not Available | Negative | 6775439 - 6776572 | 41098.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
