Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | APR52_31055 | Q9A9Z0 | Positive | 6742266 - 6743042 | 27398.6 |
| lysr family transcriptional regulator | APR52_31060 | Not Available | Negative | 6743183 - 6744142 | 35414.8 |
| aldehyde dehydrogenase | APR52_31065 | D4GP41 | Positive | 6744287 - 6745753 | 52083.1 |
| laci family transcriptional regulator | APR52_31070 | P39325 | Positive | 6745818 - 6746783 | 34881.4 |
| sugar abc transporter substrate-binding protein | APR52_31075 | P25548 | Positive | 6746792 - 6747862 | 38386.2 |
| abc transporter atp-binding protein | APR52_31080 | Q9S472 | Positive | 6747901 - 6749427 | 55593.8 |
| abc transporter permease | APR52_31085 | P0AGI6 | Positive | 6749414 - 6750622 | 42211.1 |
| sugar abc transporter atp-binding protein | APR52_31090 | P63299 | Positive | 6750627 - 6752156 | 54761.7 |
| sugar abc transporter permease | APR52_31095 | P39328 | Positive | 6752449 - 6753495 | 36544.0 |
| abc transporter permease | APR52_31100 | P37772 | Positive | 6753492 - 6754517 | 36090.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
