Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_30955 | Not Available | Positive | 6719933 - 6720256 | 11316.4 |
| blue light sensor protein | APR52_30960 | Not Available | Negative | 6720378 - 6720809 | 15570.6 |
| crp/fnr family transcriptional regulator | APR52_30965 | P51007 | Positive | 6720978 - 6721679 | 26883.6 |
| hypothetical protein | APR52_30970 | Not Available | Negative | 6721693 - 6722565 | 33015.4 |
| glucosamine-1-phosphate n-acetyltransferase | APR52_30975 | Not Available | Positive | 6722582 - 6724009 | 49527.4 |
| asnc family transcriptional regulator | APR52_30980 | Not Available | Negative | 6724016 - 6724516 | 18128.0 |
| glucosamine--fructose-6-phosphate aminotransferase | APR52_30985 | Q7WE36 | Positive | 6724675 - 6726558 | 67527.0 |
| dna glycosylase | APR52_30990 | A6TE50 | Positive | 6726578 - 6727093 | 18194.0 |
| dna-binding protein | APR52_30995 | Not Available | Positive | 6727107 - 6727721 | 22607.1 |
| acetyltransferase | APR52_31000 | Not Available | Positive | 6727729 - 6728259 | 19310.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
