Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucoamylase | APR52_30905 | Q978S7 | Negative | 6707545 - 6709362 | 68104.0 |
| trehalose phosphatase | APR52_30910 | P0CL50 | Negative | 6709581 - 6710381 | 28297.1 |
| histidine kinase | APR52_30915 | Q52969 | Negative | 6710472 - 6712226 | 63700.3 |
| phosphatase | APR52_30920 | C5CNM3 | Negative | 6712418 - 6713677 | 46260.6 |
| hypothetical protein | APR52_30925 | P17266 | Positive | 6713844 - 6714569 | 25799.9 |
| glutathione s-transferase | APR52_30930 | Not Available | Negative | 6714616 - 6715299 | 25150.2 |
| methyltransferase | APR52_30935 | P0AFV3 | Negative | 6715413 - 6715991 | 20159.9 |
| lytic transglycosylase | APR52_30940 | P39434 | Negative | 6715993 - 6718026 | 74853.1 |
| 5-formyltetrahydrofolate cyclo-ligase | APR52_30945 | Not Available | Positive | 6718036 - 6718653 | 22993.7 |
| lysr family transcriptional regulator | APR52_30950 | Not Available | Negative | 6718771 - 6719754 | 36797.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
