Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter substrate-binding protein | APR52_30855 | Not Available | Positive | 6698830 - 6699840 | 36138.1 |
| sulfonate abc transporter atp-binding protein | APR52_30860 | Q2K164 | Positive | 6699933 - 6700745 | 30269.7 |
| abc transporter permease | APR52_30865 | Not Available | Positive | 6700742 - 6701611 | 31672.5 |
| hypothetical protein | APR52_30870 | Not Available | Negative | 6701618 - 6702016 | 14700.7 |
| histidinol phosphate phosphatase | APR52_30875 | Q6NPM8 | Positive | 6702172 - 6702948 | 27411.6 |
| hypothetical protein | APR52_30880 | Not Available | Positive | 6702958 - 6703152 | 7246.3 |
| rok family transcriptional regulator | APR52_30885 | A3MUZ0 | Positive | 6703185 - 6704111 | 32335.5 |
| 2-aminoadipate aminotransferase | APR52_30890 | Not Available | Negative | 6704113 - 6705576 | 54130.3 |
| hypothetical protein | APR52_30895 | Not Available | Positive | 6705776 - 6706153 | 13594.4 |
| trehalose-6-phosphate synthase | APR52_30900 | P55612 | Negative | 6706163 - 6707548 | 52368.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
