Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna methyltransferase | APR52_30805 | C5CKU4 | Positive | 6689044 - 6689706 | 23897.0 |
| cell division protein ftsh | APR52_30810 | Q1LLA9 | Positive | 6689867 - 6691789 | 70381.8 |
| dihydropteroate synthase | APR52_30815 | P57696 | Positive | 6691861 - 6692712 | 30070.4 |
| phosphoglucosamine mutase | APR52_30820 | Not Available | Positive | 6692789 - 6694144 | 47751.3 |
| hypothetical protein | APR52_30825 | Not Available | Positive | 6694557 - 6695042 | 16631.1 |
| pilus assembly protein pilv | APR52_30830 | Not Available | Positive | 6695074 - 6695610 | 18583.7 |
| pilus assembly protein pilw | APR52_30835 | Not Available | Positive | 6695651 - 6696472 | 28902.3 |
| pilus assembly protein pilx | APR52_30840 | Not Available | Positive | 6696469 - 6697044 | 20711.0 |
| hypothetical protein | APR52_30845 | Q87B49 | Positive | 6697141 - 6697605 | 16787.6 |
| taurine dioxygenase | APR52_30850 | Not Available | Positive | 6697848 - 6698729 | 33535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
