Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 6658584 - 6658668 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 6658890 - 6658974 | Not Available |
| ribonuclease r | APR52_30665 | P44907 | Positive | 6659029 - 6661320 | 84119.3 |
| 3-oxoacyl-acp reductase | APR52_30670 | Q2UEK6 | Positive | 6661389 - 6662150 | 26460.8 |
| carbohydrate kinase | APR52_30675 | P31806 | Negative | 6662158 - 6663624 | 49376.1 |
| hypothetical protein | APR52_30680 | Not Available | Positive | 6663657 - 6664088 | 15625.5 |
| amino acid dehydrogenase | APR52_30685 | Q9RAE6 | Negative | 6664092 - 6665345 | 44564.7 |
| 30s ribosomal protein s2 | APR52_30690 | C5CKS0 | Positive | 6665791 - 6666543 | 27516.2 |
| elongation factor ts | APR52_30695 | C5CKS1 | Positive | 6666623 - 6667546 | 32519.1 |
| uridylate kinase | APR52_30700 | A1TN71 | Positive | 6667648 - 6668370 | 25316.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
