Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | APR52_30605 | P0AA18 | Negative | 6649345 - 6650076 | 27190.9 |
| hypothetical protein | APR52_30610 | Not Available | Positive | 6650235 - 6650597 | 13090.8 |
| hypothetical protein | APR52_30615 | Not Available | Positive | 6650763 - 6651410 | 22741.0 |
| 3-hydroxybutyrate dehydrogenase | APR52_30620 | Q9X6U2 | Negative | 6651459 - 6652229 | 26979.3 |
| alpha/beta hydrolase | APR52_30625 | Not Available | Positive | 6652256 - 6653245 | 35311.0 |
| gtp pyrophosphokinase | APR52_30630 | P0AG22 | Positive | 6653283 - 6655487 | 80505.5 |
| Trna-val | Not Available | Not Available | Positive | 6655555 - 6655631 | Not Available |
| hypothetical protein | APR52_30640 | Not Available | Positive | 6656061 - 6656408 | 12761.1 |
| polyhydroxyalkanoate biosynthesis repressor phar | APR52_30645 | P45368 | Positive | 6656490 - 6657050 | 21162.8 |
| ribosomal protein s12 methylthiotransferase rimo | APR52_30650 | Q12A25 | Positive | 6657090 - 6658496 | 50883.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
