Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR52_30555 | Not Available | Positive | 6638586 - 6639755 | 42971.0 |
| abc transporter substrate-binding protein | APR52_30560 | Not Available | Positive | 6639781 - 6640770 | 35023.9 |
| hypothetical protein | APR52_30565 | Not Available | Positive | 6640839 - 6641609 | 27578.1 |
| phosphoserine phosphatase | APR52_30570 | Q12A06 | Negative | 6641614 - 6642327 | 25343.9 |
| hypothetical protein | APR52_30575 | Q8ZM86 | Negative | 6642328 - 6642726 | 14415.4 |
| hypothetical protein | APR52_30580 | Not Available | Negative | 6642723 - 6642974 | 9381.95 |
| transcription-repair coupling factor | APR52_30585 | P30958 | Negative | 6643024 - 6646509 | 129275.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | APR52_30590 | Q21YT7 | Positive | 6646633 - 6647355 | 25437.8 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | APR52_30595 | A1WR07 | Positive | 6647352 - 6647840 | 17039.6 |
| histidine kinase | APR52_30600 | P0AEJ4 | Negative | 6647859 - 6649271 | 51832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
