Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | APR52_30505 | P0AB84 | Negative | 6629454 - 6630098 | 23677.8 |
| aspartate aminotransferase | APR52_30510 | Q72LL6 | Positive | 6630206 - 6631393 | 42377.3 |
| hypothetical protein | APR52_30515 | Not Available | Negative | 6631403 - 6631630 | 7936.86 |
| hypothetical protein | APR52_30520 | Not Available | Positive | 6631703 - 6632038 | 12401.4 |
| lactate dehydrogenase | APR52_30525 | Q9V0D5 | Negative | 6632039 - 6633118 | 37842.6 |
| abc transporter substrate-binding protein | APR52_30530 | Not Available | Negative | 6633133 - 6634107 | 34445.5 |
| enoyl-coa hydratase | APR52_30535 | Not Available | Positive | 6634250 - 6635032 | 27689.0 |
| acyl-coa dehydrogenase | APR52_30540 | O34421 | Positive | 6635047 - 6636141 | 38146.7 |
| acyl-coa dehydrogenase | APR52_30545 | Q07417 | Positive | 6636143 - 6637336 | 42622.0 |
| acetyl-coa acetyltransferase | APR52_30550 | Not Available | Positive | 6637357 - 6638574 | 43733.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
