Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein j | APR52_30400 | Not Available | Negative | 6609343 - 6610053 | 25587.4 |
| type ii secretion system protein gspi | APR52_30405 | Not Available | Negative | 6610053 - 6610445 | 13772.8 |
| type ii secretion system protein gsph | APR52_30410 | Not Available | Negative | 6610442 - 6610921 | 16545.0 |
| type ii secretion system protein gspg | APR52_30415 | Q00514 | Negative | 6610896 - 6611336 | 15907.3 |
| hypothetical protein | APR52_30420 | Not Available | Positive | 6611387 - 6612019 | 20712.9 |
| threonine dehydratase | APR52_30425 | P53607 | Negative | 6612071 - 6613666 | 57483.7 |
| hypothetical protein | APR52_30430 | Not Available | Positive | 6613734 - 6614864 | 42609.2 |
| porin | APR52_30435 | Not Available | Negative | 6615064 - 6616374 | 45569.2 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | APR52_30440 | C5CPL7 | Positive | 6616655 - 6617284 | 22269.5 |
| osmotically inducible protein c | APR52_30445 | P0ADX3 | Negative | 6617297 - 6617746 | 15728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
