Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_30350 | Not Available | Negative | 6596609 - 6598711 | 71714.6 |
| 5'-nucleotidase | APR52_30355 | Q9BXI3 | Negative | 6598943 - 6599929 | 35913.0 |
| hypothetical protein | APR52_30360 | Not Available | Negative | 6599947 - 6600531 | 21288.3 |
| type ii secretion system protein gspf | APR52_30365 | P31705 | Negative | 6600571 - 6601809 | 43708.9 |
| type ii secretion system protein gspe | APR52_30370 | Q9I5N9 | Negative | 6601825 - 6603216 | 50125.4 |
| type ii secretion system protein gspd | APR52_30375 | P35818 | Negative | 6603278 - 6605608 | 81321.2 |
| general secretion pathway protein gspn | APR52_30380 | Not Available | Negative | 6605616 - 6606416 | 27763.3 |
| general secretion pathway protein gspm | APR52_30385 | Not Available | Negative | 6606445 - 6607011 | 20070.4 |
| general secretion pathway protein gspl | APR52_30390 | Not Available | Negative | 6607008 - 6608219 | 42654.5 |
| general secretion pathway protein gspk | APR52_30395 | Not Available | Negative | 6608348 - 6609346 | 35579.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
