Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | APR52_02350 | Q9I163 | Negative | 497861 - 498727 | 31062.0 |
| lysr family transcriptional regulator | APR52_02355 | Not Available | Positive | 498858 - 499760 | 32679.1 |
| hypothetical protein | APR52_02360 | Not Available | Positive | 499992 - 500591 | 21261.5 |
| gtp-binding protein | APR52_02365 | Not Available | Positive | 500605 - 501147 | 19108.2 |
| hypothetical protein | APR52_02370 | Not Available | Positive | 501144 - 501527 | 13136.9 |
| hypothetical protein | APR52_02375 | Not Available | Positive | 501621 - 501980 | 12829.8 |
| nitroreductase | APR52_02380 | P0ACY2 | Positive | 502217 - 502825 | 22270.7 |
| hypothetical protein | APR52_02385 | Not Available | Positive | 503003 - 503656 | 23811.6 |
| hypothetical protein | APR52_02390 | Not Available | Negative | 503665 - 504324 | 22654.8 |
| 2-hydroxy-3-oxopropionate reductase | APR52_02395 | F4I907 | Positive | 504577 - 505428 | 29492.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
