Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | APR52_14190 | Not Available | Positive | 3073842 - 3075677 | 64301.9 |
| Attl | Not Available | Not Available | Positive | 4450559 - 4450570 | Not Available |
| Integrase | APR52_20665 | P45198 | Positive | 4450922 - 4451884 | 37099.4 |
| hypothetical protein | APR52_20670 | Not Available | Positive | 4452099 - 4452326 | 8720.63 |
| hypothetical protein | APR52_20675 | Not Available | Positive | 4452347 - 4453243 | 33360.0 |
| O-antigen beta polymerase | APR52_20680 | Not Available | Positive | 4453256 - 4454506 | 46495.6 |
| hypothetical protein | APR52_20685 | Not Available | Positive | 4454487 - 4454993 | 17002.0 |
| Putative endolysin | APR52_20690 | Q9T1X2 | Negative | 4455067 - 4455426 | 13091.8 |
| hypothetical protein | APR52_20695 | Not Available | Negative | 4455606 - 4456010 | 14668.2 |
| hypothetical protein | APR52_20700 | Not Available | Negative | 4456007 - 4456411 | 14137.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
