Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanophycin synthetase | APR52_30200 | P58572 | Negative | 6557085 - 6559376 | 81586.7 |
| abc transporter | APR52_30205 | Q2LVL0 | Positive | 6559462 - 6561741 | 83412.9 |
| hypothetical protein | APR52_30210 | Not Available | Positive | 6561741 - 6562226 | 17614.1 |
| hypothetical protein | APR52_30215 | Not Available | Negative | 6562455 - 6563165 | 25718.5 |
| alkaline phosphatase | APR52_30220 | P08289 | Negative | 6563162 - 6564682 | 53250.1 |
| alkaline phosphatase | APR52_30225 | P05187 | Negative | 6564726 - 6566195 | 51258.5 |
| hypothetical protein | APR52_30230 | Not Available | Negative | 6566357 - 6566767 | 14337.8 |
| 7-cyano-7-deazaguanine synthase | APR52_30235 | Q12FK2 | Positive | 6566927 - 6567655 | 26630.8 |
| abc transporter atp-binding protein | APR52_30240 | P31826 | Negative | 6567613 - 6569421 | 67275.6 |
| phosphohydrolase | APR52_30245 | D0E8I5 | Negative | 6569541 - 6570107 | 20848.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
