Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldolase | APR52_30145 | Q9HSB8 | Positive | 6542777 - 6543640 | 31275.9 |
| hypothetical protein | APR52_30150 | Not Available | Positive | 6543815 - 6548530 | 166297.0 |
| hypothetical protein | APR52_30155 | Not Available | Negative | 6548561 - 6549463 | 31038.4 |
| cupin | APR52_30160 | Not Available | Negative | 6549519 - 6550193 | 24169.3 |
| hypothetical protein | APR52_30165 | Not Available | Negative | 6550244 - 6550753 | 18989.8 |
| tartrate dehydrogenase | APR52_30175 | P76251 | Negative | 6551248 - 6552330 | 39265.9 |
| hypothetical protein | APR52_30180 | Not Available | Negative | 6552804 - 6553070 | 10155.1 |
| hypothetical protein | APR52_30185 | Not Available | Negative | 6553283 - 6553801 | 17777.3 |
| hypothetical protein | APR52_30190 | Not Available | Negative | 6553843 - 6554241 | 13533.1 |
| cyanophycin synthetase | APR52_30195 | P73833 | Negative | 6554448 - 6557015 | 90364.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
