Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin oxidoreductase | APR52_30045 | C0SP82 | Positive | 6519074 - 6521158 | 75264.8 |
| aminopeptidase | APR52_30050 | Not Available | Positive | 6521155 - 6522285 | 41610.0 |
| polyhydroxyalkanoic acid synthase | APR52_30055 | Not Available | Positive | 6522278 - 6522592 | 11605.7 |
| short-chain dehydrogenase | APR52_30060 | Q8JIS3 | Negative | 6522605 - 6523342 | 24935.1 |
| hypothetical protein | APR52_30065 | P39211 | Negative | 6523503 - 6525029 | 54591.7 |
| iditol 2-dehydrogenase | APR52_30070 | A0QXD8 | Negative | 6525026 - 6526159 | 40456.1 |
| ribose abc transporter permease | APR52_30075 | Not Available | Negative | 6526208 - 6527188 | 33087.6 |
| ribonucleotide-diphosphate reductase subunit alpha | APR52_30080 | Not Available | Negative | 6527185 - 6528702 | 54695.6 |
| laci family transcriptional regulator | APR52_30085 | P36949 | Negative | 6528731 - 6529651 | 31838.6 |
| arac family transcriptional regulator | APR52_30090 | Not Available | Negative | 6529764 - 6530663 | 33343.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
