Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m23 | APR52_29995 | P0ADE7 | Negative | 6508568 - 6509032 | 16077.0 |
| type iii pantothenate kinase | APR52_30000 | B9MCN0 | Positive | 6509168 - 6509950 | 27492.3 |
| hypothetical protein | APR52_30005 | P39385 | Negative | 6510085 - 6511308 | 44667.2 |
| acetylornithine deacetylase | APR52_30010 | Q9CLT9 | Negative | 6511362 - 6512528 | 41871.9 |
| lysr family transcriptional regulator | APR52_30015 | Not Available | Negative | 6512564 - 6513478 | 33268.1 |
| permease | APR52_30020 | O32140 | Positive | 6513588 - 6514919 | 45210.7 |
| cytidine deaminase | APR52_30025 | Not Available | Positive | 6514935 - 6515453 | 18505.0 |
| amidohydrolase | APR52_30030 | Not Available | Positive | 6515529 - 6516731 | 43053.5 |
| hypothetical protein | APR52_30035 | Not Available | Positive | 6516728 - 6517840 | 40661.8 |
| abc transporter permease | APR52_30040 | Not Available | Negative | 6517865 - 6518992 | 39649.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
