Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | APR52_29890 | P0AE13 | Negative | 6485852 - 6487369 | 56554.7 |
| lysine decarboxylase | APR52_29895 | Not Available | Negative | 6487415 - 6487963 | 18257.4 |
| abc transporter permease | APR52_29900 | Not Available | Negative | 6487914 - 6488735 | 28420.4 |
| iron abc transporter substrate-binding protein | APR52_29905 | Not Available | Negative | 6488746 - 6489786 | 37491.0 |
| abc transporter atp-binding protein | APR52_29910 | Q7NWX3 | Negative | 6489851 - 6490879 | 36770.5 |
| abc transporter permease | APR52_29915 | P27370 | Negative | 6490876 - 6491652 | 27249.8 |
| lysr family transcriptional regulator | APR52_29920 | Not Available | Positive | 6491837 - 6492751 | 32679.4 |
| 2-dehydropantoate 2-reductase | APR52_29925 | O50098 | Positive | 6492807 - 6493709 | 31247.7 |
| glutathione reductase | APR52_29930 | P23189 | Negative | 6493718 - 6495079 | 48328.8 |
| pyruvate phosphate dikinase | APR52_29935 | P23538 | Positive | 6495233 - 6497269 | 73171.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
