Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nodulation protein nodj | APR52_29840 | P55475 | Negative | 6476403 - 6477245 | 30745.2 |
| nodulation factor abc transporter atp-binding protein nodi | APR52_29845 | Q13ZJ1 | Negative | 6477299 - 6478273 | 35385.8 |
| hypothetical protein | APR52_29850 | Not Available | Positive | 6478515 - 6479390 | 30565.1 |
| hypothetical protein | APR52_29855 | Not Available | Positive | 6479387 - 6480061 | 24606.7 |
| lysr family transcriptional regulator | APR52_29860 | Not Available | Negative | 6480071 - 6480961 | 32572.5 |
| glutathione s-transferase | APR52_29865 | Not Available | Positive | 6481082 - 6481729 | 23602.3 |
| pyridoxamine 5'-phosphate oxidase | APR52_29870 | Not Available | Positive | 6481741 - 6482721 | 34895.7 |
| cytochrome | APR52_29875 | Q9ZHQ1 | Negative | 6482738 - 6483916 | 41822.5 |
| arsr family transcriptional regulator | APR52_29880 | P96683 | Positive | 6483999 - 6484700 | 24857.0 |
| twin-arginine translocation pathway signal protein | APR52_29885 | Not Available | Negative | 6484712 - 6485638 | 32084.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
