Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | APR52_02300 | Not Available | Positive | 485462 - 485896 | 15720.8 |
| gmp synthetase | APR52_02305 | A2SG95 | Positive | 485907 - 487526 | 59014.2 |
| nadph:quinone oxidoreductase | APR52_02310 | Q08257 | Negative | 487576 - 488547 | 34317.9 |
| arsr family transcriptional regulator | APR52_02315 | C0H3S9 | Negative | 488614 - 488916 | 11039.3 |
| hydrolase | APR52_02320 | P9WKP2 | Negative | 488971 - 490008 | 38321.9 |
| hypothetical protein | APR52_02325 | Not Available | Negative | 490044 - 490634 | 21182.5 |
| ornithine cyclodeaminase | APR52_02330 | Q9HDZ0 | Negative | 490832 - 491776 | 33275.9 |
| ferredoxin:oxidoreductase fad/nad(p)-binding protein | APR52_02335 | Q71EW5 | Negative | 491808 - 495278 | 126025.0 |
| short chain fatty acid transporter | APR52_02340 | P76460 | Negative | 495275 - 496717 | 51081.3 |
| hypothetical protein | APR52_02345 | P39592 | Positive | 496880 - 497818 | 34487.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
