Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrin-iii methyltransferase | APR52_29690 | Q9I2W4 | Positive | 6444473 - 6445285 | 27690.5 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR52_29695 | Q81GC1 | Positive | 6445369 - 6446472 | 38960.1 |
| abc transporter substrate-binding protein | APR52_29700 | Not Available | Positive | 6446531 - 6447799 | 46175.6 |
| abc transporter permease | APR52_29705 | Not Available | Positive | 6447804 - 6448721 | 33830.4 |
| abc transporter permease | APR52_29710 | Not Available | Positive | 6449011 - 6449901 | 31697.4 |
| fatty acid hydroxylase | APR52_29715 | Not Available | Positive | 6449963 - 6451093 | 43089.0 |
| distant relative of cell wall-associated hydrolase | APR52_29720 | P37056 | Positive | 6451093 - 6451881 | 27625.4 |
| hypothetical protein | APR52_29725 | P37631 | Positive | 6451878 - 6453110 | 43967.6 |
| 30s ribosomal protein s21 | APR52_29730 | A1TNY6 | Positive | 6453223 - 6453435 | 8506.61 |
| glutamyl-trna amidotransferase | APR52_29735 | Not Available | Positive | 6453564 - 6454013 | 15768.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
