Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | APR52_29635 | O58489 | Negative | 6430563 - 6431726 | 42151.6 |
| abc transporter permease | APR52_29640 | Not Available | Negative | 6431771 - 6433051 | 46609.8 |
| heat-shock protein hsp20 | APR52_29645 | Not Available | Positive | 6433173 - 6433547 | 13672.3 |
| trna threonylcarbamoyl adenosine modification protein tsad | APR52_29650 | C5CT30 | Negative | 6433617 - 6434669 | 36552.5 |
| antitermination regulator | APR52_29655 | Q48468 | Positive | 6434750 - 6436042 | 47535.0 |
| nitrate transporter | APR52_29660 | P73452 | Positive | 6436393 - 6437637 | 45412.7 |
| nitrate abc transporter permease | APR52_29665 | P73451 | Positive | 6437648 - 6438571 | 33110.4 |
| nitrate abc transporter atp-binding protein | APR52_29670 | P39459 | Positive | 6438568 - 6439377 | 29168.7 |
| nitrate reductase | APR52_29680 | P39458 | Positive | 6440706 - 6443483 | 99761.9 |
| glycosyl transferase | APR52_29685 | Q1IZP8 | Positive | 6443571 - 6444476 | 32015.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
