Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | APR52_29585 | C5CT19 | Negative | 6422426 - 6422905 | 17596.5 |
| nadh:ubiquinone oxidoreductase subunit a | APR52_29590 | B1Y827 | Negative | 6422918 - 6423277 | 13389.6 |
| Trna-leu | Not Available | Not Available | Positive | 6423341 - 6423425 | Not Available |
| preprotein translocase subunit secg | APR52_29600 | Q9HV52 | Negative | 6423543 - 6423947 | 12792.6 |
| triosephosphate isomerase | APR52_29605 | A1TLL4 | Negative | 6423985 - 6424746 | 26079.2 |
| nad(p)h-quinone oxidoreductase | APR52_29610 | A0A345BJP0 | Negative | 6424760 - 6425758 | 34403.7 |
| polyribonucleotide nucleotidyltransferase | APR52_29615 | A1TLL2 | Negative | 6425855 - 6428200 | 84991.6 |
| 30s ribosomal protein s15 | APR52_29620 | C5CT25 | Negative | 6428407 - 6428673 | 9889.12 |
| transporter | APR52_29625 | Not Available | Negative | 6428764 - 6429681 | 31512.5 |
| hypothetical protein | APR52_29630 | Not Available | Negative | 6429765 - 6430562 | 27887.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
