Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein b | APR52_29485 | Q9RQ29 | Negative | 6400316 - 6401881 | 55801.9 |
| hemolysin d | APR52_29490 | P27303 | Negative | 6401936 - 6403276 | 46626.4 |
| rnd transporter | APR52_29495 | P24126 | Negative | 6403306 - 6404808 | 52145.8 |
| marr family transcriptional regulator | APR52_29500 | Not Available | Negative | 6404801 - 6405337 | 19865.5 |
| abc transporter | APR52_29505 | Q7NZU6 | Positive | 6405427 - 6407214 | 63193.6 |
| hypothetical protein | APR52_29510 | Not Available | Negative | 6407340 - 6407807 | 16723.9 |
| adp-ribose pyrophosphatase | APR52_29515 | P54570 | Negative | 6407816 - 6408415 | 21953.9 |
| hypothetical protein | APR52_29520 | Not Available | Negative | 6408447 - 6408749 | 11051.8 |
| nadh:ubiquinone oxidoreductase subunit n | APR52_29525 | A1VM73 | Negative | 6408777 - 6410264 | 52643.2 |
| nadh:ubiquinone oxidoreductase subunit m | APR52_29530 | P50974 | Negative | 6410289 - 6411767 | 53836.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
