Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | APR52_29380 | Not Available | Positive | 6380899 - 6381447 | 20386.3 |
| hydrolase | APR52_29385 | Not Available | Positive | 6381486 - 6382316 | 28729.7 |
| iclr family transcriptional regulator | APR52_29390 | Not Available | Positive | 6382355 - 6383191 | 30603.8 |
| short-chain dehydrogenase | APR52_29395 | Q9BY49 | Positive | 6383197 - 6384030 | 28865.6 |
| hypothetical protein | APR52_29400 | P08142 | Positive | 6384023 - 6385729 | 59559.8 |
| aspartate dehydrogenase | APR52_29405 | Q0K391 | Positive | 6385762 - 6386559 | 26799.4 |
| aldehyde dehydrogenase | APR52_29410 | P71016 | Positive | 6386568 - 6388043 | 52868.0 |
| glyoxalase | APR52_29415 | Not Available | Positive | 6388059 - 6389030 | 35519.7 |
| laci family transcriptional regulator | APR52_29420 | Not Available | Positive | 6389027 - 6390031 | 34843.7 |
| salicylate hydroxylase | APR52_29425 | Q88FY2 | Positive | 6390187 - 6391347 | 41029.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
