Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_29330 | Not Available | Negative | 6369405 - 6370163 | 27122.8 |
| hypothetical protein | APR52_29335 | Not Available | Positive | 6370376 - 6370678 | 10757.3 |
| hypothetical protein | APR52_29340 | Not Available | Positive | 6370921 - 6371205 | 10490.4 |
| oxalate/formate mfs antiporter | APR52_29345 | Q51330 | Negative | 6371273 - 6372598 | 46733.9 |
| ferritin | APR52_29350 | Not Available | Negative | 6372810 - 6373634 | 31898.8 |
| alanine--trna ligase | APR52_29355 | A6SVH6 | Positive | 6373901 - 6376525 | 94693.1 |
| 2-dehydropantoate 2-reductase | APR52_29360 | Q9HRF0 | Positive | 6376545 - 6377561 | 35809.0 |
| amino acid dehydrogenase | APR52_29365 | Q89T28 | Positive | 6377614 - 6378870 | 44851.2 |
| abc transporter substrate-binding protein | APR52_29370 | Not Available | Positive | 6379059 - 6380042 | 33318.3 |
| short-chain dehydrogenase | APR52_29375 | Not Available | Positive | 6380050 - 6380865 | 27788.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
