Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_02250 | Q04713 | Negative | 476975 - 477973 | 36549.4 |
| short-chain dehydrogenase | APR52_02255 | P0A2D2 | Positive | 478105 - 478893 | 27219.6 |
| alanine-phosphoribitol ligase | APR52_02260 | Not Available | Positive | 478945 - 480219 | 46306.0 |
| hypothetical protein | APR52_02265 | A1JMW4 | Positive | 480222 - 480764 | 19156.2 |
| carboxymethylenebutenolidase | APR52_02270 | Not Available | Positive | 480816 - 482054 | 45486.2 |
| cyclase | APR52_02275 | A5F376 | Positive | 482132 - 482578 | 16334.5 |
| protein rnfh | APR52_02280 | Q15V26 | Positive | 482586 - 482921 | 12361.6 |
| hypothetical protein | APR52_02285 | Not Available | Negative | 482937 - 483446 | 18288.8 |
| inosine-5'-monophosphate dehydrogenase | APR52_02290 | P31002 | Positive | 483656 - 485125 | 51730.4 |
| prevent-host-death protein | APR52_02295 | Not Available | Positive | 485217 - 485465 | 8911.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
