Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_29230 | P94678 | Positive | 6345193 - 6346092 | 32149.2 |
| lysr family transcriptional regulator | APR52_29235 | Not Available | Positive | 6346177 - 6347097 | 33231.3 |
| disulfide bond formation protein dsba | APR52_29240 | Q51948 | Negative | 6347110 - 6347718 | 22820.4 |
| methyltransferase | APR52_29245 | Q2UPB6 | Negative | 6347733 - 6348545 | 30041.6 |
| hypothetical protein | APR52_29250 | Not Available | Positive | 6348853 - 6349668 | 28368.7 |
| hypothetical protein | APR52_29255 | Not Available | Positive | 6349637 - 6351019 | 50893.1 |
| dna polymerase | APR52_29260 | Q63XR8 | Positive | 6351012 - 6354356 | 125168.0 |
| hypothetical protein | APR52_29265 | Not Available | Positive | 6354461 - 6355417 | 34074.3 |
| hypothetical protein | APR52_29270 | Not Available | Negative | 6355449 - 6355979 | 20319.4 |
| hypothetical protein | APR52_29275 | Not Available | Negative | 6356009 - 6356242 | 8754.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
