Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | APR52_29130 | Not Available | Negative | 6321597 - 6322511 | 34041.0 |
| doxx family protein | APR52_29135 | Not Available | Positive | 6322657 - 6323112 | 16521.0 |
| oxidoreductase | APR52_29140 | Not Available | Positive | 6323143 - 6323790 | 22239.6 |
| fad-binding molybdopterin dehydrogenase | APR52_29145 | Not Available | Positive | 6323783 - 6324778 | 35432.5 |
| xanthine dehydrogenase | APR52_29150 | Q8X6J4 | Positive | 6324782 - 6327004 | 78426.6 |
| gtp-binding protein | APR52_29155 | Not Available | Negative | 6327018 - 6328445 | 50650.6 |
| hypothetical protein | APR52_29160 | Not Available | Negative | 6328442 - 6329842 | 50096.2 |
| cytoplasmic protein | APR52_29165 | Not Available | Positive | 6330325 - 6330870 | 20168.3 |
| type vi secretion protein | APR52_29170 | Not Available | Positive | 6330889 - 6332778 | 69395.7 |
| tetr family transcriptional regulator | APR52_29175 | Not Available | Negative | 6332787 - 6333407 | 21990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
