Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase | APR52_29080 | Not Available | Positive | 6304941 - 6305402 | 17417.9 |
| hypothetical protein | APR52_29085 | Q9KTF4 | Negative | 6305423 - 6306598 | 40201.9 |
| glutamate-ammonia-ligase adenylyltransferase | APR52_29090 | Q63R39 | Negative | 6306591 - 6309407 | 104714.0 |
| hypothetical protein | APR52_29095 | Not Available | Positive | 6309433 - 6313782 | 153690.0 |
| acyltransferase | APR52_29100 | P55175 | Positive | 6313779 - 6314594 | 29719.4 |
| histidine kinase | APR52_29105 | P37739 | Positive | 6314672 - 6316708 | 74630.3 |
| two-component system response regulator | APR52_29110 | Not Available | Positive | 6316753 - 6317379 | 23162.2 |
| flagellar motor protein motb | APR52_29115 | Not Available | Negative | 6317441 - 6318013 | 19599.0 |
| hypothetical protein | APR52_29120 | Not Available | Negative | 6318123 - 6318785 | 22369.4 |
| hypothetical protein | APR52_29125 | Not Available | Positive | 6319613 - 6321535 | 70988.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
