Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 4 fimbrial biosynthesis protein | APR52_28980 | Not Available | Negative | 6284498 - 6284908 | 14876.2 |
| polymerase | APR52_28985 | Not Available | Positive | 6285212 - 6286939 | 62759.1 |
| molybdenum cofactor biosynthesis protein moac | APR52_28990 | C5CRA3 | Negative | 6286936 - 6287430 | 16860.5 |
| peptidase m48 | APR52_28995 | Q9KQ40 | Positive | 6287484 - 6289070 | 57609.3 |
| hypothetical protein | APR52_29000 | O34648 | Negative | 6289087 - 6289440 | 12311.9 |
| hypothetical protein | APR52_29005 | Not Available | Negative | 6289591 - 6290055 | 17014.7 |
| hypothetical protein | APR52_29010 | Not Available | Negative | 6290134 - 6290880 | 26205.1 |
| fe-s oxidoreductase | APR52_29015 | Not Available | Positive | 6291375 - 6291842 | 17540.2 |
| hypothetical protein | APR52_29020 | Not Available | Positive | 6291855 - 6292157 | 11379.6 |
| hypothetical protein | APR52_29025 | P0A1S7 | Negative | 6292168 - 6292728 | 20598.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
