Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase | APR52_28930 | Q92AI7 | Positive | 6269916 - 6270719 | 28561.1 |
| hypothetical protein | APR52_28935 | Not Available | Positive | 6270795 - 6271445 | 22666.5 |
| guanylate cyclase | APR52_28940 | Not Available | Positive | 6271503 - 6273764 | 81358.4 |
| 3',5'-cyclic-nucleotide phosphodiesterase | APR52_28945 | Not Available | Positive | 6273791 - 6274594 | 29206.2 |
| hypothetical protein | APR52_28950 | Not Available | Positive | 6277020 - 6277214 | 7826.52 |
| hypothetical protein | APR52_28955 | Q9HVM8 | Negative | 6277647 - 6281522 | 137528.0 |
| hypothetical protein | APR52_28960 | Not Available | Negative | 6281596 - 6282261 | 23545.9 |
| hypothetical protein | APR52_28965 | Not Available | Negative | 6282264 - 6283346 | 37946.9 |
| hypothetical protein | APR52_28970 | Not Available | Negative | 6283438 - 6283899 | 16144.6 |
| hypothetical protein | APR52_28975 | Not Available | Negative | 6283893 - 6284504 | 21264.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
