Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | APR52_28880 | Not Available | Negative | 6261614 - 6262285 | 24528.9 |
| marr family transcriptional regulator | APR52_28885 | Not Available | Negative | 6262359 - 6262844 | 17624.1 |
| dna recombination/repair protein reca | APR52_28890 | A9BQB0 | Positive | 6262991 - 6264052 | 37478.3 |
| recombinase recx | APR52_28895 | B1XY02 | Positive | 6264120 - 6264575 | 16615.9 |
| polyketide cyclase | APR52_28900 | Not Available | Positive | 6264562 - 6264978 | 15067.9 |
| hypothetical protein | APR52_28905 | Not Available | Positive | 6265053 - 6265805 | 25868.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | APR52_28910 | Q1IXY5 | Negative | 6265857 - 6266780 | 33121.3 |
| succinyl-coa synthetase subunit beta | APR52_28915 | Q122H7 | Positive | 6266989 - 6268155 | 41319.0 |
| succinate--coa ligase | APR52_28920 | P80865 | Positive | 6268167 - 6269060 | 31102.8 |
| hypothetical protein | APR52_28925 | O31603 | Positive | 6269180 - 6269869 | 24172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
