Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | APR52_28830 | Not Available | Positive | 6250847 - 6251935 | 39260.1 |
| ap endonuclease | APR52_28835 | Not Available | Negative | 6251945 - 6253000 | 38846.7 |
| peptidase c26 | APR52_28840 | Q9CE00 | Positive | 6253107 - 6254000 | 33186.7 |
| hypothetical protein | APR52_28845 | Not Available | Negative | 6254014 - 6254193 | 5724.7 |
| abc transporter substrate-binding protein | APR52_28850 | Not Available | Negative | 6254290 - 6255276 | 34635.8 |
| dna topoisomerase iii | APR52_28855 | Q81IH1 | Negative | 6255280 - 6258231 | 108336.0 |
| lysine methyltransferase | APR52_28860 | Q24742 | Positive | 6258372 - 6259073 | 26031.7 |
| biotin--acetyl-coa-carboxylase ligase | APR52_28865 | P29906 | Positive | 6259076 - 6259903 | 29180.1 |
| sporulation protein | APR52_28870 | Not Available | Positive | 6259918 - 6260127 | 7624.26 |
| histidine kinase | APR52_28875 | Not Available | Negative | 6260137 - 6261576 | 52428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
