Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | APR52_28780 | Not Available | Negative | 6239113 - 6240332 | 44425.5 |
| transcriptional regulator | APR52_28785 | A0A0H2ZDG9 | Positive | 6240446 - 6241333 | 31944.3 |
| acyltransferase | APR52_28790 | Not Available | Negative | 6241270 - 6242487 | 44392.3 |
| hypothetical protein | APR52_28795 | P50329 | Negative | 6242544 - 6243551 | 36555.1 |
| hypothetical protein | APR52_28800 | Not Available | Negative | 6243569 - 6243889 | 11650.8 |
| multidrug transporter | APR52_28805 | P18205 | Positive | 6244230 - 6245705 | 49674.2 |
| atp-dependent rna helicase | APR52_28810 | P21693 | Negative | 6245680 - 6247086 | 50706.3 |
| translation initiation factor if-1 | APR52_28815 | A1TRD3 | Negative | 6247224 - 6247502 | 10231.3 |
| mfs transporter | APR52_28820 | O34367 | Negative | 6247921 - 6249117 | 39128.8 |
| gntr family transcriptional regulator | APR52_28825 | Not Available | Positive | 6249252 - 6250733 | 53548.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
