Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | APR52_02200 | C5CLW3 | Positive | 465644 - 468667 | 107181.0 |
| ribosome-binding factor a | APR52_02205 | C5CLW4 | Positive | 468812 - 469183 | 13689.5 |
| trna pseudouridine synthase b | APR52_02210 | A1WLI1 | Positive | 469186 - 470142 | 34025.0 |
| gtp-binding protein typa | APR52_02215 | H9L427 | Positive | 470139 - 471971 | 67263.9 |
| hypothetical protein | APR52_02220 | Not Available | Negative | 472014 - 473945 | 68847.7 |
| atp-binding protein | APR52_02225 | Not Available | Negative | 474060 - 474455 | 13647.2 |
| anti-sigma factor | APR52_02230 | Not Available | Negative | 474535 - 475353 | 29634.1 |
| rna polymerase subunit sigma-24 | APR52_02235 | B3Q6P8 | Negative | 475358 - 475909 | 19929.2 |
| hypothetical protein | APR52_02240 | Not Available | Negative | 475931 - 476314 | 13361.8 |
| ssra-binding protein | APR52_02245 | B9MGQ0 | Negative | 476413 - 476889 | 18091.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
